5F9H
Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G, I... (A, C, E, G, I...) | Probable ATP-dependent RNA helicase DDX58 | polymer | 695 | 79594.7 | 6 | UniProt (O95786) Pfam (PF00270) Pfam (PF18119) Pfam (PF00271) Pfam (PF11648) | Homo sapiens (Human) | DEAD box protein 58,RIG-I-like receptor 1,RLR-1,Retinoic acid-inducible gene 1 protein,RIG-1,Retinoic acid-inducible gene I protein,RIG-I |
| 2 | B, D, F, H, J... (B, D, F, H, J...) | RNA (5'-R(P*AP*AP*UP*AP*UP*AP*AP*UP*AP*GP*UP*GP*AP*UP*AP*UP*UP*AP*UP*AP*UP*UP*C)-3') | polymer | 23 | 7304.4 | 6 | synthetic construct | ||
| 3 | AA, DA, M, R, T... (I, K, A, C, E...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 4 | BA, EA, N, O, P... (I, K, A, E, G) | MAGNESIUM ION | non-polymer | 24.3 | 8 | Chemie (MG) | |||
| 5 | CA, FA, Q, S, V... (J, L, B, D, F...) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 6 | Chemie (GTP) |
Sequence modifications
A, C, E, G, I, K: 232 - 925 (UniProt: O95786)
| PDB | External Database | Details |
|---|---|---|
| Ser 231 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 521394.5 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 3726.0 | |
| All* | Total formula weight | 525120.5 |
