5F86
Crystal structure of Drosophila Poglut1 (Rumi) complexed with its substrate protein (EGF repeat)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | O-glucosyltransferase rumi | polymer | 402 | 46820.2 | 1 | UniProt (Q8T045) Pfam (PF05686) In PDB | Drosophila melanogaster (Fruit fly) | |
2 | B | Coagulation factor IX | polymer | 50 | 5710.2 | 1 | UniProt (P00740) Pfam (PF00008) In PDB | Homo sapiens (Human) | Christmas factor,Plasma thromboplastin component,PTC |
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | A | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
5 | water | water | 18.0 | 133 | Chemie (HOH) |
Sequence modifications
A: 21 - 407 (UniProt: Q8T045)
B: 46 - 84 (UniProt: P00740)
PDB | External Database | Details |
---|---|---|
Ala 13 | - | expression tag |
Ala 14 | - | expression tag |
Gln 15 | - | expression tag |
Pro 16 | - | expression tag |
Ala 17 | - | expression tag |
Glu 18 | - | expression tag |
Ala 19 | - | expression tag |
Leu 20 | - | expression tag |
Ala 408 | - | expression tag |
Arg 409 | - | expression tag |
Ala 410 | - | expression tag |
Leu 411 | - | expression tag |
Val 412 | - | expression tag |
Pro 413 | - | expression tag |
Arg 414 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 43 | - | initiating methionine |
Asp 44 | - | expression tag |
Ile 45 | - | expression tag |
Leu 85 | - | expression tag |
Glu 86 | - | expression tag |
His 87 | - | expression tag |
His 88 | - | expression tag |
His 89 | - | expression tag |
His 90 | - | expression tag |
His 91 | - | expression tag |
His 92 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 52530.4 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 668.5 | |
All* | Total formula weight | 53198.9 |