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5F85

Crystal structure of Drosophila Poglut1 (Rumi) complexed with its substrate protein (EGF repeat) and UDP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
O-glucosyltransferase rumipolymer40246820.21UniProt (Q8T045)
Pfam (PF05686)
Drosophila melanogaster (Fruit fly)
2B
(B)
Coagulation factor IXpolymer505710.21UniProt (P00740)
Pfam (PF00008)
Homo sapiens (Human)Christmas factor,Plasma thromboplastin component,PTC
3C
(A)
URIDINE-5'-DIPHOSPHATEnon-polymer404.21Chemie (UDP)
4D
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
5E, F, G, H, I
(A)
SULFATE IONnon-polymer96.15Chemie (SO4)
6J, K
(A, B)
waterwater18.0125Chemie (HOH)
Sequence modifications
A: 21 - 407 (UniProt: Q8T045)
PDBExternal DatabaseDetails
Ala 13-expression tag
Ala 14-expression tag
Gln 15-expression tag
Pro 16-expression tag
Ala 17-expression tag
Glu 18-expression tag
Ala 19-expression tag
Leu 20-expression tag
Ala 408-expression tag
Arg 409-expression tag
Ala 410-expression tag
Leu 411-expression tag
Val 412-expression tag
Pro 413-expression tag
Arg 414-expression tag
B: 46 - 84 (UniProt: P00740)
PDBExternal DatabaseDetails
Met 43-initiating methionine
Asp 44-expression tag
Ile 45-expression tag
Leu 85-expression tag
Glu 86-expression tag
His 87-expression tag
His 88-expression tag
His 89-expression tag
His 90-expression tag
His 91-expression tag
His 92-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight52530.4
Non-Polymers*Number of molecules7
Total formula weight976.6
All*Total formula weight53507.0
*Water molecules are not included.

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PDB entries from 2024-11-06

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