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5F0J

Structure of retromer VPS26-VPS35 subunits bound to SNX3

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Vacuolar protein sorting-associated protein 35polymer46253288.31UniProt (Q96QK1)
Pfam (PF03635)
Homo sapiens (Human)hVPS35,Maternal-embryonic 3,Vesicle protein sorting 35
2B
(B)
Vacuolar protein sorting-associated protein 26Apolymer34140239.61UniProt (O75436)
Pfam (PF03643)
Homo sapiens (Human)Vesicle protein sorting 26A,hVPS26
3C
(C)
Sorting nexin-3polymer16719193.81UniProt (O60493)
Pfam (PF00787)
Homo sapiens (Human)Protein SDP3
4D, E, FA, GA, HA...
(A, C, B)
SULFATE IONnon-polymer96.16Chemie (SO4)
5F, IA, Q, R, S
(A, C, B)
GLYCEROLnon-polymer92.15Chemie (GOL)
6AA, BA, CA, DA, EA...
(B, C, A)
1,2-ETHANEDIOLnon-polymer62.124Chemie (EDO)
7MA, NA, OA
(A, B, C)
waterwater18.095Chemie (HOH)
Sequence modifications
A: 14 - 470 (UniProt: Q96QK1)
PDBExternal DatabaseDetails
Gly 9-expression tag
Ala 10-expression tag
Met 11-expression tag
Gly 12-expression tag
Ser 13-expression tag
B: 2 - 326 (UniProt: O75436)
PDBExternal DatabaseDetails
Mse -1-expression tag
Gly 0-expression tag
Mse 1-expression tag
Mse 327-expression tag
Gly 328-expression tag
Leu 329-expression tag
Val 330-expression tag
Pro 331-expression tag
Arg 332-expression tag
Gly 333-expression tag
Ser 334-expression tag
His 335-expression tag
His 336-expression tag
His 337-expression tag
His 338-expression tag
His 339-expression tag
C: 1 - 162 (UniProt: O60493)
PDBExternal DatabaseDetails
Gly -4-expression tag
Ala -3-expression tag
Met -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight112721.7
Non-Polymers*Number of molecules35
Total formula weight2526.5
All*Total formula weight115248.2
*Water molecules are not included.

246704

PDB entries from 2025-12-24

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