Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5F0J

Structure of retromer VPS26-VPS35 subunits bound to SNX3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2014-09-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97893
Spacegroup nameC 1 2 1
Unit cell lengths372.820, 75.580, 57.530
Unit cell angles90.00, 97.87, 90.00
Refinement procedure
Resolution56.980 - 2.700
R-factor0.2091
Rwork0.207
R-free0.24610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fau 2yps
RMSD bond length0.008
RMSD bond angle1.198
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]57.0002.850
High resolution limit [Å]2.6907.9902.690
Rmerge0.0900.0280.800
Rmeas0.1070.0330.951
Total number of observations292428
Number of reflections85401328413008
<I/σ(I)>12.0938.871.51
Completeness [%]98.39992.6
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62910.9 M AmSO4, 0.1 M MES pH 6.0

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon