5EUH
Crystal structure of the c-di-GMP-bound GGDEF domain of P. fluorescens GcbC
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Putative GGDEF domain membrane protein | polymer | 172 | 19063.3 | 4 | UniProt (Q3K751) Pfam (PF00990) In PDB | Pseudomonas fluorescens (strain Pf0-1) | |
2 | A, B, C | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 4 | Chemie (C2E) | |||
3 | A, B | SULFATE ION | non-polymer | 96.1 | 5 | Chemie (SO4) | |||
4 | water | water | 18.0 | 8 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 339 - 501 (UniProt: Q3K751)
PDB | External Database | Details |
---|---|---|
Ala 502 | - | expression tag |
Leu 503 | - | expression tag |
Glu 504 | - | expression tag |
His 505 | - | expression tag |
His 506 | - | expression tag |
His 507 | - | expression tag |
His 508 | - | expression tag |
His 509 | - | expression tag |
His 510 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 76253.2 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 3242.0 | |
All* | Total formula weight | 79495.1 |