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5EUH

Crystal structure of the c-di-GMP-bound GGDEF domain of P. fluorescens GcbC

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Putative GGDEF domain membrane proteinpolymer17219063.34UniProt (Q3K751)Pseudomonas fluorescens (strain Pf0-1)
2E, H, I, M
(A, B, C)
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)non-polymer690.44Chemie (C2E)
3F, G, J, K, L
(A, B)
SULFATE IONnon-polymer96.15Chemie (SO4)
4N, O, P, Q
(A, B, C, D)
waterwater18.08Chemie (HOH)
Sequence modifications
A, B, C, D: 339 - 501 (UniProt: Q3K751)
PDBExternal DatabaseDetails
Ala 502-expression tag
Leu 503-expression tag
Glu 504-expression tag
His 505-expression tag
His 506-expression tag
His 507-expression tag
His 508-expression tag
His 509-expression tag
His 510-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight76253.2
Non-Polymers*Number of molecules9
Total formula weight3242.0
All*Total formula weight79495.1
*Water molecules are not included.

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PDB entries from 2026-02-25

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