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5EUD

S1P Lyase Bacterial Surrogate bound to N-(1-(4-(3-hydroxyprop-1-yn-1-yl)phenyl)-2-((4-methoxy-2,5-dimethylbenzyl)amino)ethyl)-5-methylisoxazole-3-carboxamide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BPutative sphingosine-1-phosphate lyasepolymer51455741.02UniProt (Q67PY4)
Pfam (PF00282)
In PDB
Symbiobacterium thermophilum (strain T / IAM 14863)
2A, BPHOSPHATE IONnon-polymer95.02Chemie (PO4)
3A~{N}-[(1~{S})-2-[(4-methoxy-2,5-dimethyl-phenyl)methylamino]-1-[4-(3-oxidanylprop-1-ynyl)phenyl]ethyl]-5-methyl-1,2-oxazole-3-carboxamidenon-polymer447.52Chemie (5S6)
4waterwater18.0423Chemie (HOH)
Sequence modifications
A, B: 2 - 507 (UniProt: Q67PY4)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Pro 1-expression tag
Phe 249Tyr 249engineered mutation
Ile 344Leu 344engineered mutation
Ala 346Phe 346engineered mutation
Ser 497Leu 497engineered mutation
His 508-expression tag
His 509-expression tag
His 510-expression tag
His 511-expression tag
His 512-expression tag
His 513-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight111482.1
Non-Polymers*Number of molecules4
Total formula weight1085.0
All*Total formula weight112567.1
*Water molecules are not included.

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PDB entries from 2024-06-26

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