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5EQV

1.45 Angstrom Crystal Structure of Bifunctional 2',3'-cyclic Nucleotide 2'-phosphodiesterase/3'-Nucleotidase Periplasmic Precursor Protein from Yersinia pestis with Phosphate bound to the Active site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor proteinpolymer34037137.91UniProt (A0A0B6NVJ4)
Pfam (PF00149)
UniProt (by SIFTS) (A0A5P8YBY3)
Yersinia pestis CO92
2B, C
(A)
FE (III) IONnon-polymer55.82Chemie (FE)
3D, E
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
4F
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
5G
(A)
D-MALATEnon-polymer134.11Chemie (MLT)
6H
(A)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
7I
(A)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
8J
(A)
waterwater18.0629Chemie (HOH)
Sequence modifications
A: 26 - 362 (UniProt: A0A0B6NVJ4)
PDBExternal DatabaseDetails
Ser 23-expression tag
Asn 24-expression tag
Ala 25-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight37137.9
Non-Polymers*Number of molecules8
Total formula weight659.0
All*Total formula weight37797.0
*Water molecules are not included.

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PDB entries from 2025-07-02

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