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5EJ9

EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2 min and isochorismate for 13 min

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(A, B, C, D, E...)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthasepolymer55661433.88UniProt (P17109)
Pfam (PF02776)
Pfam (PF16582)
Pfam (PF02775)
Escherichia coli K12ThDP-dependent enzyme MenD,SEPHCHC synthase,Menaquinone biosynthesis protein MenD
2DA, GA, I, LA, N...
(F, G, A, H, B...)
THIAMINE DIPHOSPHATEnon-polymer425.38Chemie (TPP)
3EA, HA, J, MA, O...
(F, G, A, H, B...)
MANGANESE (II) IONnon-polymer54.98Chemie (MN)
4AA, FA, IA, K, NA...
(E, F, G, A, H...)
GLYCEROLnon-polymer92.18Chemie (GOL)
5BA, CA, JA, KA, L...
(E, F, G, H, A...)
FORMIC ACIDnon-polymer46.08Chemie (FMT)
6OA, PA, QA, RA, SA...
(A, B, C, D, E...)
waterwater18.05397Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight491470.2
Non-Polymers*Number of molecules32
Total formula weight4947.0
All*Total formula weight496417.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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