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5ED1

Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from S. cerevisiae BDF2 gene

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)
Double-stranded RNA-specific editase 1polymer40345004.42UniProt (P78563)
Pfam (PF02137)
Homo sapiens (human)adenosine deaminase acting on RNA
2B
(B)
RNA (5'-R(*UP*UP*CP*CP*CP*CP*AP*CP*AP*UP*UP*(8AZ)P*GP*AP*CP*GP*UP*UP*CP*AP*GP*UP*C)-3')polymer237225.31Saccharomyces cerevisiae
3C
(C)
RNA (5'-R(*GP*AP*CP*UP*GP*AP*AP*CP*GP*AP*CP*CP*AP*AP*UP*GP*UP*GP*GP*GP*GP*AP*A)-3')polymer237489.61Saccharomyces cerevisiae
4E, G
(A, D)
INOSITOL HEXAKISPHOSPHATEnon-polymer660.02Chemie (IHP)
5F, H
(A, D)
ZINC IONnon-polymer65.42Chemie (ZN)
6I, J, K
(A, B, D)
waterwater18.033Chemie (HOH)
Sequence modifications
A, D: 299 - 701 (UniProt: P78563)
PDBExternal DatabaseDetails
Gln 488Glu 516engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight104723.7
Non-Polymers*Number of molecules4
Total formula weight1450.9
All*Total formula weight106174.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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