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5E8E

Crystal structure of thrombin bound to an exosite 1-specific IgA Fab

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AIGA FAB LIGHT CHAINpolymer21523544.31Homo sapiens (HUMAN)
2BIGA FAB HEAVY CHAINpolymer22924768.61Homo sapiens (HUMAN)
3HTHROMBIN HEAVY CHAINpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
In PDB
Homo sapiens (Human)Coagulation factor II
4LTHROMBIN LIGHT CHAINpolymer364096.51UniProt (P00734)
Pfam (PF09396)
In PDB
Homo sapiens (Human)Coagulation factor II
5C2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
6DN-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1405.31In PDB
GlyTouCan (G08394CG)
7A, HDI(HYDROXYETHYL)ETHERnon-polymer106.13Chemie (PEG)
8B, HPHOSPHATE IONnon-polymer95.05Chemie (PO4)
9HCITRIC ACIDnon-polymer192.11Chemie (CIT)
10HSODIUM IONnon-polymer23.01Chemie (NA)
11HD-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamidenon-polymer454.01BIRD (PRD_000020)
Chemie (0G6)
12waterwater18.0407Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight82189.6
BranchedNumber of molecules2
Total formula weight1829.7
Non-Polymers*Number of molecules11
Total formula weight1462.3
All*Total formula weight85481.6
*Water molecules are not included.

217705

PDB entries from 2024-03-27

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