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5E6M

Crystal structure of human wild type GlyRS bound with tRNAGly

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Glycine--tRNA ligasepolymer69378704.82UniProt (P41250)
Pfam (PF00458)
Pfam (PF00587)
Pfam (PF03129)
Homo sapiens (Human)Diadenosine tetraphosphate synthetase,AP-4-A synthetase,Glycyl-tRNA synthetase,GlyRS
2C, D
(C, E)
tRNA(Gly)polymer7423900.02GenBank (174921)Homo sapiens
3E, G
(A, B)
GLYCYL-ADENOSINE-5'-PHOSPHATEnon-polymer404.32Chemie (GAP)
4F
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
5H, I
(C, E)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
6J, K, L, M
(A, B, C, E)
waterwater18.072Chemie (HOH)
Sequence modifications
A, B: 1 - 685 (UniProt: P41250)
PDBExternal DatabaseDetails
Leu 686-expression tag
Glu 687-expression tag
His 688-expression tag
His 689-expression tag
His 690-expression tag
His 691-expression tag
His 692-expression tag
His 693-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight205209.7
Non-Polymers*Number of molecules5
Total formula weight1022.0
All*Total formula weight206231.6
*Water molecules are not included.

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PDB entries from 2025-10-29

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