5DZY

Protocadherin beta 8 extracellular cadherin domains 1-4

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E...	Pcdhb8 protein	polymer	426	46732.9	6	UniProt (A8E4K6) Pfam (PF08266) Pfam (PF00028) UniProt (by SIFTS) (Q91XZ2) In PDB	Mus musculus (Mouse)
2	G, H, K	alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		367.3	3	In PDB GlyTouCan (G86851RC)
3	I	beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		1625.5	1	In PDB GlyTouCan (G71513XV)
4	J	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	1	In PDB GlyTouCan (G15407YE)
5	L	alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose	branched		894.8	1	In PDB GlyTouCan (G42466VF)
6	B, E, C, A, D...	alpha-D-mannopyranose	non-polymer		180.2	18	Chemie (MAN)
7	D, F, B, E, C...	CALCIUM ION	non-polymer		40.1	54	Chemie (CA)
8	F, B	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	3	Chemie (NAG)
9		water	water		18.0	6	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 1 - 418 (UniProt: A8E4K6)

PDB	External Database	Details
His 419	-	expression tag
His 420	-	expression tag
His 421	-	expression tag
His 422	-	expression tag
His 423	-	expression tag
His 424	-	expression tag
His 425	-	expression tag
His 426	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	280397.6
Branched	Number of molecules	6
	Total formula weight	4208.9
Non-Polymers*	Number of molecules	75
	Total formula weight	6070.6
All*	Total formula weight	290677.2

*Water molecules are not included.