5DYS
Crystal Structure of T94I rhodopsin mutant
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Rhodopsin | polymer | 349 | 39046.6 | 1 | UniProt (P02699) Pfam (PF10413) Pfam (PF00001) In PDB | Bos taurus (Bovine) | |
2 | B | alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G51945PF) | |||
3 | A | RETINAL | non-polymer | 284.4 | 1 | Chemie (RET) | |||
4 | A | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
5 | A | octyl beta-D-glucopyranoside | non-polymer | 292.4 | 2 | Chemie (BOG) | |||
6 | A | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
7 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
8 | water | water | 18.0 | 29 | Chemie (HOH) |
Sequence modifications
A: 1 - 348 (UniProt: P02699)
PDB | External Database | Details |
---|---|---|
Ace 0 | - | acetylation |
Cys 2 | Asn 2 | engineered mutation |
Ile 94 | Thr 94 | engineered mutation |
Cys 282 | Asp 282 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 39046.6 | |
Branched | Number of molecules | 1 |
Total formula weight | 910.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1596.2 | |
All* | Total formula weight | 41553.6 |