5DYS
Crystal Structure of T94I rhodopsin mutant
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Rhodopsin | polymer | 349 | 39046.6 | 1 | UniProt (P02699) Pfam (PF10413) Pfam (PF00001) | Bos taurus (Bovine) | |
| 2 | B (B) | alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G51945PF) | |||
| 3 | C (A) | RETINAL | non-polymer | 284.4 | 1 | Chemie (RET) | |||
| 4 | D, E (A) | ACETATE ION | non-polymer | 59.0 | 2 | Chemie (ACT) | |||
| 5 | F, I (A) | octyl beta-D-glucopyranoside | non-polymer | 292.4 | 2 | Chemie (BOG) | |||
| 6 | G, H (A) | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) | |||
| 7 | J (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 8 | K (A) | water | water | 18.0 | 29 | Chemie (HOH) |
Sequence modifications
A: 1 - 348 (UniProt: P02699)
| PDB | External Database | Details |
|---|---|---|
| Ace 0 | - | acetylation |
| Cys 2 | Asn 2 | engineered mutation |
| Ile 94 | Thr 94 | engineered mutation |
| Cys 282 | Asp 282 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 39046.6 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 910.8 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1596.2 | |
| All* | Total formula weight | 41553.6 |
