5DY9
Y68T Hfq from Methanococcus jannaschii in complex with AMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Hfq-like protein | polymer | 71 | 8247.7 | 12 | UniProt (Q58830) Pfam (PF17209) | Methanocaldococcus jannaschii DSM 2661 | Uncharacterized protein MJ1435 |
| 2 | M, R, X (A, E, G) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 3 | Chemie (AMP) | |||
| 3 | N, O, Q (B, D) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 4 | EA, P, T, V (J, C, E, F) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 5 | DA, IA, S (J, L, E) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 3 | Chemie (TRS) | |||
| 6 | AA, CA, FA, GA, U (H, I, K, E) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
| 7 | HA, W (K, F) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 8 | BA, Y, Z (I, G, H) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 9 | JA, KA, LA, MA, NA... (A, B, C, D, E...) | water | water | 18.0 | 1036 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L: 1 - 71 (UniProt: Q58830)
| PDB | External Database | Details |
|---|---|---|
| Thr 68 | Tyr 68 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 98972.4 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 2610.2 | |
| All* | Total formula weight | 101582.6 |
