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5DPR

Crystal structure of PLEKHM1 LIR-fused human LC3A_2-121

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Pleckstrin homology domain-containing family M member 1,Microtubule-associated proteins 1A/1B light chain 3Apolymer13615932.14UniProt (Q9Y4G2)
UniProt (Q9H492)
Pfam (PF02991)
Homo sapiens (Human)PH domain-containing family M member 1,162 kDa adapter protein,AP162,Autophagy-related protein LC3 A,Autophagy-related ubiquitin-like modifier LC3 A,MAP1 light chain 3-like protein 1,MAP1A/MAP1B light chain 3 A,MAP1A/MAP1B LC3 A,Microtubule-associated protein 1 light chain 3 alpha
2E, F, G, H
(A, B, C, D)
waterwater18.042Chemie (HOH)
Sequence modifications
A, B, C, D: -1 - 10 (UniProt: Q9Y4G2)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
Gly 11-linker
Ser 12-linker
A, B, C, D: 13 - 132 (UniProt: Q9H492)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight63728.4
All*Total formula weight63728.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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