5DPM
Crystal structure of UbiG mutant in complex with SAH
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquinone biosynthesis O-methyltransferase | polymer | 225 | 25020.5 | 1 | UniProt (A8A296) Pfam (PF13489) UniProt (by SIFTS) (P17993) | Escherichia coli O9:H4 (strain HS) | 2-octaprenyl-6-hydroxyphenol methylase,3-demethylubiquinone-8 3-O-methyltransferase |
| 2 | B (A) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 1 | Chemie (SAH) PubChem (16760024) PubChem (193) PubChem (25210495) PubChem (13792) PubChem (177678424) PubChem (44361184) PubChem (21125603) PubChem (46936206) PubChem (50989525) PubChem (25203782) PubChem (51380914) PubChem (52224398) PubChem (189149) PubChem (57544532) PubChem (439155) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (52224400) PubChem (5284331) PubChem (6419189) PubChem (118374891) PubChem (118560068) PubChem (71170554) PubChem (13231890) PubChem (164157219) PubChem (126969526) PubChem (129105892) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) | |||
| 3 | C (A) | water | water | 18.0 | 86 | Chemie (HOH) |
Sequence modifications
A: 1 - 240 (UniProt: A8A296)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | expression tag |
| Gly -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| - | Lys 165 | deletion |
| - | Ser 166 | deletion |
| - | Trp 167 | deletion |
| - | Leu 168 | deletion |
| - | Met 169 | deletion |
| - | Ala 170 | deletion |
| - | Val 171 | deletion |
| - | Val 172 | deletion |
| - | Gly 173 | deletion |
| - | Ala 174 | deletion |
| - | Glu 175 | deletion |
| - | His 176 | deletion |
| - | Ile 177 | deletion |
| - | Leu 178 | deletion |
| - | Arg 179 | deletion |
| - | Met 180 | deletion |
| - | Val 181 | deletion |
| - | Pro 182 | deletion |
| - | Lys 183 | deletion |
| - | Gly 184 | deletion |
| - | Thr 185 | deletion |
| - | His 186 | deletion |
| - | Asp 187 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 25020.5 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 384.4 | |
| All* | Total formula weight | 25404.9 |
