Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DPM

Crystal structure of UbiG mutant in complex with SAH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-04-26
DetectorMAR scanner 345 mm plate
Wavelength(s)0.9792
Spacegroup nameC 1 2 1
Unit cell lengths139.842, 39.326, 40.112
Unit cell angles90.00, 94.34, 90.00
Refinement procedure
Resolution39.997 - 2.100
R-factor0.1785
Rwork0.176
R-free0.21520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4kdc
RMSD bond length0.008
RMSD bond angle1.095
Data reduction softwareHKL-2000
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.180
High resolution limit [Å]2.1002.100
Number of reflections12887
<I/σ(I)>11.93
Completeness [%]99.299.2
Redundancy3.53.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52870.1 M citric acid pH 5.0, 20% (v/v) 2-Methyl-2,4-pentanediol

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon