5DNY
Structure of the ATPrS-Mre11/Rad50-DNA complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | DNA double-strand break repair protein Mre11 | polymer | 386 | 45370.9 | 2 | UniProt (Q58719) Pfam (PF00149) Pfam (PF22226) In PDB | Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) | |
2 | B, D | DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase | polymer | 371 | 42389.9 | 2 | UniProt (Q58718) Pfam (PF13476) In PDB | Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) | |
3 | E | DNA (27-MER) | polymer | 27 | 8364.4 | 1 | synthetic construct | DNA A1 | |
4 | F | DNA (27-MER) | polymer | 27 | 8226.3 | 1 | synthetic construct | DNA A2 | |
5 | A, C | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
6 | B, D | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | non-polymer | 523.2 | 2 | Chemie (AGS) | |||
7 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 366 (UniProt: Q58719)
B, D: 1 - 824 (UniProt: Q58718)
B, D: 825 - 1005 (UniProt: Q58718)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
B, D: 825 - 1005 (UniProt: Q58718)
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 192112.5 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 1143.7 | |
All* | Total formula weight | 193256.2 |