5D4K
Crystal structure of the human polymeric Ig receptor (pIgR) ectodomain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Polymeric immunoglobulin receptor | polymer | 557 | 61483.0 | 2 | UniProt (P01833) Pfam (PF07686) | Homo sapiens (Human) | Poly-Ig receptor,Hepatocellular carcinoma-associated protein TB6 |
| 2 | C, D (C, D) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G86851RC) | |||
| 3 | E, F, G, J, K... (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 4 | H, I, M, N (A, B) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 5 | O, P (A, B) | water | water | 18.0 | 58 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 547 (UniProt: P01833)
| PDB | External Database | Details |
|---|---|---|
| Ser 347 | Gly 365 | variant |
| Gly 548 | - | expression tag |
| Ser 549 | - | expression tag |
| Trp 550 | - | expression tag |
| Ser 551 | - | expression tag |
| His 552 | - | expression tag |
| Pro 553 | - | expression tag |
| Gln 554 | - | expression tag |
| Phe 555 | - | expression tag |
| Glu 556 | - | expression tag |
| Lys 557 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 122966.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 734.7 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1711.5 | |
| All* | Total formula weight | 125412.2 |
