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5D29

X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a hydroxamate inhibitor JHU241

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Glutamate carboxypeptidase 2polymer69578341.41UniProt (Q04609)
Pfam (PF02225)
Pfam (PF04389)
Pfam (PF04253)
Homo sapiens (Human)Cell growth-inhibiting gene 27 protein,Folate hydrolase 1,Folylpoly-gamma-glutamate carboxypeptidase,FGCP,Glutamate carboxypeptidase II,GCPII,Membrane glutamate carboxypeptidase,mGCP,N-acetylated-alpha-linked acidic dipeptidase I,NAALADase I,Prostate-specific membrane antigen,PSMA,Pteroylpoly-gamma-glutamate carboxypeptidase
2B, C
(B, C)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
3D
(D)
beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G31886NL)
4E, F, G, H
(A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
5I, J
(A)
ZINC IONnon-polymer65.42Chemie (ZN)
6K
(A)
CALCIUM IONnon-polymer40.11Chemie (CA)
7L
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
8M
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
9N
(A)
4-[(2~{S})-2-carboxy-5-(oxidanylamino)-5-oxidanylidene-pentyl]benzoic acidnon-polymer281.31Chemie (5Q1)
10O
(A)
waterwater18.0364Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight78341.4
BranchedNumber of molecules3
Total formula weight1597.5
Non-Polymers*Number of molecules10
Total formula weight1431.5
All*Total formula weight81370.3
*Water molecules are not included.

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PDB entries from 2024-11-06

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