5D1M
Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (P199A)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Ubiquitin-conjugating enzyme E2 D2 | polymer | 147 | 16755.2 | 1 | UniProt (P62837) Pfam (PF00179) In PDB | Homo sapiens (Human) | Ubiquitin carrier protein D2,Ubiquitin-conjugating enzyme E2(17)KB 2,Ubiquitin-conjugating enzyme E2-17 kDa 2,Ubiquitin-protein ligase D2,p53-regulated ubiquitin-conjugating enzyme 1 |
| 2 | B | E3 ubiquitin-protein ligase RNF25 | polymer | 133 | 15571.5 | 1 | UniProt (Q96BH1) Pfam (PF13639) In PDB | Homo sapiens (Human) | RING finger protein 25 |
| 3 | A | OXALATE ION | non-polymer | 88.0 | 1 | Chemie (OXL) | |||
| 4 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 5 | B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 7 | water | water | 18.0 | 375 | Chemie (HOH) |
Sequence modifications
B: 126 - 258 (UniProt: Q96BH1)
| PDB | External Database | Details |
|---|---|---|
| Ala 199 | Pro 199 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 32326.7 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 449.1 | |
| All* | Total formula weight | 32775.8 |
