5D1L
Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (Y165A)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquitin-conjugating enzyme E2 D2 | polymer | 147 | 16755.2 | 1 | UniProt (P62837) Pfam (PF00179) | Homo sapiens (Human) | Ubiquitin carrier protein D2,Ubiquitin-conjugating enzyme E2(17)KB 2,Ubiquitin-conjugating enzyme E2-17 kDa 2,Ubiquitin-protein ligase D2,p53-regulated ubiquitin-conjugating enzyme 1 |
| 2 | B (B) | E3 ubiquitin-protein ligase RNF25 | polymer | 133 | 15505.4 | 1 | UniProt (Q96BH1) Pfam (PF13639) | Homo sapiens (Human) | RING finger protein 25 |
| 3 | C (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 4 | D (A) | OXALATE ION | non-polymer | 88.0 | 1 | Chemie (OXL) | |||
| 5 | E, F (B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | G, H (A, B) | water | water | 18.0 | 385 | Chemie (HOH) |
Sequence modifications
B: 126 - 258 (UniProt: Q96BH1)
| PDB | External Database | Details |
|---|---|---|
| Ala 165 | Tyr 165 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 32260.7 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 325.0 | |
| All* | Total formula weight | 32585.6 |
