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5D0C

Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Bromodomain-containing protein 4polymer14116767.31UniProt (O60885)
Pfam (PF00439)
Homo sapiens (Human)Protein HUNK1
2B, C, D
(A)
NITRATE IONnon-polymer62.03Chemie (NO3)
3E, F
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
4G
(A)
N-[(1-acetylpiperidin-4-yl)methyl]-1-ethyl-2-oxo-1,2-dihydrobenzo[cd]indole-6-sulfonamidenon-polymer415.51Chemie (E0B)
5H
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
6I
(A)
waterwater18.0115Chemie (HOH)
Sequence modifications
A: 44 - 168 (UniProt: O60885)
PDBExternal DatabaseDetails
Met 28-initiating methionine
Lys 29-expression tag
Lys 30-expression tag
Gly 31-expression tag
His 32-expression tag
His 33-expression tag
His 34-expression tag
His 35-expression tag
His 36-expression tag
His 37-expression tag
Leu 38-expression tag
Val 39-expression tag
Pro 40-expression tag
Arg 41-expression tag
Gly 42-expression tag
Ser 43-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight16767.3
Non-Polymers*Number of molecules7
Total formula weight817.8
All*Total formula weight17585.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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