5D0C
Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-09-08 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97915 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 30.030, 46.270, 47.440 |
| Unit cell angles | 90.00, 96.74, 90.00 |
Refinement procedure
| Resolution | 47.110 - 1.490 |
| R-factor | 0.1654 |
| Rwork | 0.165 |
| R-free | 0.18330 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3mxf |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.583 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless (0.5.9) |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.110 | 47.110 | 1.520 |
| High resolution limit [Å] | 1.490 | 8.180 | 1.490 |
| Rmerge | 0.060 | 0.059 | 0.100 |
| Rpim | 0.026 | 0.035 | 0.041 |
| Total number of observations | 134610 | 385 | 6788 |
| Number of reflections | 19102 | ||
| <I/σ(I)> | 23.9 | 21.3 | 15.2 |
| Completeness [%] | 90.8 | 61 | 96.5 |
| Redundancy | 7 | 4.3 | 6.9 |
| CC(1/2) | 0.996 | 0.984 | 0.993 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 20% PEG3350, 0.2M NaNO3, 0.1M HEPES, 10% EtGhly,pH 7.5 |






