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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

5CVO

WDR48:USP46~ubiquitin ternary complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)		WD repeat-containing protein 48polymer67772897.22UniProt (Q8TAF3)
Pfam (PF00400)
Pfam (PF11816)		Homo sapiens (Human)USP1-associated factor 1,WD repeat endosomal protein,p80
2B, E
(B, E)		Ubiquitin carboxyl-terminal hydrolase 46polymer35841959.62UniProt (P62068)
Pfam (PF00443)		Homo sapiens (Human)Deubiquitinating enzyme 46,Ubiquitin thioesterase 46,Ubiquitin-specific-processing protease 46
3C, F
(C, F)		Polyubiquitin-Bpolymer9610748.22UniProt (P0CG47)
Pfam (PF00240)		Homo sapiens (Human)
4G, H
(B, E)		ZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A, D: 1 - 677 (UniProt: Q8TAF3)
PDBExternal DatabaseDetails
Unk 563Asn 563SEE REMARK 999
Unk 564Lys 564SEE REMARK 999
Unk 565Ile 565SEE REMARK 999
Unk 566Pro 566SEE REMARK 999
Unk 567Phe 567SEE REMARK 999
Unk 568Tyr 568SEE REMARK 999
Unk 569Leu 569SEE REMARK 999
Unk 570Gln 570SEE REMARK 999
Unk 571Pro 571SEE REMARK 999
Unk 572His 572SEE REMARK 999
Unk 573Ala 573SEE REMARK 999
Unk 574Ser 574SEE REMARK 999
Unk 575Ser 575SEE REMARK 999
Unk 576Gly 576SEE REMARK 999
Unk 577Ala 577SEE REMARK 999
Unk 578Lys 578SEE REMARK 999
Unk 579Thr 579SEE REMARK 999
Unk 580Leu 580SEE REMARK 999
Unk 581Lys 581SEE REMARK 999
Unk 582Lys 582SEE REMARK 999
Unk 583Asp 583SEE REMARK 999
Unk 584Arg 584SEE REMARK 999
Unk 585Leu 585SEE REMARK 999
Unk 586Ser 586SEE REMARK 999
Unk 587Ala 587SEE REMARK 999
Unk 588Ser 588SEE REMARK 999
Unk 589Asp 589SEE REMARK 999
Unk 590Met 590SEE REMARK 999
Unk 591Leu 591SEE REMARK 999
Unk 592Gln 592SEE REMARK 999
Unk 593Val 593SEE REMARK 999
Unk 594Arg 594SEE REMARK 999
Unk 595Lys 595SEE REMARK 999
Unk 596Val 596SEE REMARK 999
Unk 597Met 597SEE REMARK 999
Unk 598Glu 598SEE REMARK 999
Unk 599His 599SEE REMARK 999
Unk 600Val 600SEE REMARK 999
Unk 601Tyr 601SEE REMARK 999
Unk 602Glu 602SEE REMARK 999
Unk 603Lys 603SEE REMARK 999
Unk 604Ile 604SEE REMARK 999
Unk 605Ile 605SEE REMARK 999
Unk 606Asn 606SEE REMARK 999
Unk 607Leu 607SEE REMARK 999
Unk 608Asp 608SEE REMARK 999
Unk 609Asn 609SEE REMARK 999
Unk 610Glu 610SEE REMARK 999
Unk 611Ser 611SEE REMARK 999
Unk 612Gln 612SEE REMARK 999
Unk 613Thr 613SEE REMARK 999
Unk 614Thr 614SEE REMARK 999
Unk 615Ser 615SEE REMARK 999
Unk 616Ser 616SEE REMARK 999
Unk 617Ser 617SEE REMARK 999
Unk 618Asn 618SEE REMARK 999
Unk 619Asn 619SEE REMARK 999
Unk 620Glu 620SEE REMARK 999
Unk 621Lys 621SEE REMARK 999
Unk 622Pro 622SEE REMARK 999
Unk 623Gly 623SEE REMARK 999
Unk 624Glu 624SEE REMARK 999
Unk 625Gln 625SEE REMARK 999
Unk 626Glu 626SEE REMARK 999
Unk 627Lys 627SEE REMARK 999
Unk 628Glu 628SEE REMARK 999
Unk 629Glu 629SEE REMARK 999
Unk 630Asp 630SEE REMARK 999
Unk 631Ile 631SEE REMARK 999
Unk 632Ala 632SEE REMARK 999
Unk 633Val 633SEE REMARK 999
Unk 634Leu 634SEE REMARK 999
Unk 635Ala 635SEE REMARK 999
Unk 636Glu 636SEE REMARK 999
Unk 637Glu 637SEE REMARK 999
Unk 638Lys 638SEE REMARK 999
Unk 639Ile 639SEE REMARK 999
Unk 640Glu 640SEE REMARK 999
Unk 641Leu 641SEE REMARK 999
Unk 642Leu 642SEE REMARK 999
Unk 643Cys 643SEE REMARK 999
Unk 644Gln 644SEE REMARK 999
Unk 645Asp 645SEE REMARK 999
Unk 646Gln 646SEE REMARK 999
Unk 647Val 647SEE REMARK 999
Unk 648Leu 648SEE REMARK 999
Unk 649Asp 649SEE REMARK 999
Unk 650Pro 650SEE REMARK 999
Unk 651Asn 651SEE REMARK 999
Unk 652Met 652SEE REMARK 999
Unk 653Asp 653SEE REMARK 999
Unk 654Leu 654SEE REMARK 999
Unk 655Arg 655SEE REMARK 999
Unk 656Thr 656SEE REMARK 999
Unk 657Val 657SEE REMARK 999
Unk 658Lys 658SEE REMARK 999
Unk 659His 659SEE REMARK 999
Unk 660Phe 660SEE REMARK 999
Unk 661Ile 661SEE REMARK 999
Unk 662Trp 662SEE REMARK 999
Unk 663Lys 663SEE REMARK 999
Unk 664Ser 664SEE REMARK 999
Unk 665Gly 665SEE REMARK 999
Unk 666Gly 666SEE REMARK 999
Unk 667Asp 667SEE REMARK 999
Unk 668Leu 668SEE REMARK 999
Unk 669Thr 669SEE REMARK 999
Unk 670Leu 670SEE REMARK 999
Unk 671His 671SEE REMARK 999
Unk 672Tyr 672SEE REMARK 999
Unk 673Arg 673SEE REMARK 999
Unk 674Gln 674SEE REMARK 999
Unk 675Lys 675SEE REMARK 999
Unk 676Ser 676SEE REMARK 999
Unk 677Thr 677SEE REMARK 999
B, E: 25 - 366 (UniProt: P62068)
PDBExternal DatabaseDetails
Met 9-expression tag
His 10-expression tag
His 11-expression tag
His 12-expression tag
His 13-expression tag
His 14-expression tag
His 15-expression tag
Gly 16-expression tag
Glu 17-expression tag
Asn 18-expression tag
Leu 19-expression tag
Tyr 20-expression tag
Phe 21-expression tag
Gln 22-expression tag
Gly 23-expression tag
Ser 24-expression tag
C, F: 1 - 76 (UniProt: P0CG47)
PDBExternal DatabaseDetails
Met -19-expression tag
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight251210.0
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight251340.8
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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