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5CSE

Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Streptavidinpolymer15916646.02UniProt (P22629)
Pfam (PF01382)
Streptomyces avidinii
2C, E
(A, B)
chloro{di-tert-butyl[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]-lambda~5~-phosphanyl}(1-phenylprop-1-ene-1,3-diyl-kappa~2~C~1~,C~3~)palladiumnon-polymer673.62Chemie (SVP)
3D, F
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4G, H
(A, B)
waterwater18.050Chemie (HOH)
Sequence modifications
A, B: 14 - 134 (UniProt: P22629)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ala 2-expression tag
Ser 3-expression tag
Met 4-expression tag
Thr 5-expression tag
Gly 6-expression tag
Gly 7-expression tag
Gln 8-expression tag
Gln 9-expression tag
Met 10-expression tag
Gly 11-expression tag
Arg 12-expression tag
Asp 13-expression tag
Tyr 112Ser 136engineered mutation
Glu 121Lys 145engineered mutation
Pro 135-expression tag
Ser 136-expression tag
Ala 137-expression tag
Ala 138-expression tag
Ser 139-expression tag
Ile 140-expression tag
Asp 141-expression tag
Ala 142-expression tag
Ala 143-expression tag
Lys 144-expression tag
Lys 145-expression tag
Ala 146-expression tag
Gly 147-expression tag
Val 148-expression tag
Asn 149-expression tag
Asn 150-expression tag
Gly 151-expression tag
Asn 152-expression tag
Pro 153-expression tag
Leu 154-expression tag
Asp 155-expression tag
Ala 156-expression tag
Val 157-expression tag
Gln 158-expression tag
Gln 159-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight33292.1
Non-Polymers*Number of molecules4
Total formula weight1418.1
All*Total formula weight34710.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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