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5COV

Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+Mn

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Naegleria gruberi RNA ligasepolymer34038663.81UniProt (D2W2Z5)
Pfam (PF21189)
Pfam (PF09414)
Naegleria gruberi (Amoeba)
2B
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
3C
(A)
waterwater18.049Chemie (HOH)
Sequence modifications
A: 1 - 339 (UniProt: D2W2Z5)
PDBExternal DatabaseDetails
Ser 0-expression tag
Met 170Lys 170engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight38663.8
Non-Polymers*Number of molecules1
Total formula weight54.9
All*Total formula weight38718.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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