Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5COV

Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+Mn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2014-12-09
DetectorPSI PILATUS 6M
Wavelength(s)0.97920
Spacegroup nameP 32
Unit cell lengths55.479, 55.479, 98.551
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution27.740 - 2.200
R-factor0.19442
Rwork0.191
R-free0.26711
RMSD bond length0.012
RMSD bond angle1.610
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0123)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.2002.200
Rmerge0.290
Number of reflections16304
<I/σ(I)>22.12
Completeness [%]95.084.6
Redundancy2.32
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1 M HEPES, 30% PEG 6000, 1 mM Mn

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon