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5COU

Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+ATP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Naegleria gruberi RNA ligasepolymer34038663.81UniProt (D2W2Z5)
Pfam (PF21189)
Pfam (PF09414)
Naegleria gruberi (Amoeba)
2B
(A)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
3C, D
(A)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
4E
(A)
waterwater18.0290Chemie (HOH)
Sequence modifications
A: 1 - 339 (UniProt: D2W2Z5)
PDBExternal DatabaseDetails
Ser 0-expression tag
Met 170Lys 170engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight38663.8
Non-Polymers*Number of molecules3
Total formula weight617.1
All*Total formula weight39280.9
*Water molecules are not included.

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PDB entries from 2026-01-14

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