5CO4
Structural insights into the 2-OH methylation of C/U34 on tRNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (B, A) | Putative tRNA (cytidine(34)-2'-O)-methyltransferase | polymer | 178 | 20055.2 | 2 | UniProt (Q72G96) Pfam (PF00588) | Thermus thermophilus HB27 | TrmL, tRNA (cytidine/uridine-2'-O-)-methyltransferase |
| 2 | C, E (B, A) | 5'-DEOXY-5'-METHYLTHIOADENOSINE | non-polymer | 297.3 | 2 | Chemie (MTA) | |||
| 3 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | F, G (B, A) | water | water | 18.0 | 314 | Chemie (HOH) |
Sequence modifications
B, A: 1 - 149 (UniProt: Q72G96)
| PDB | External Database | Details |
|---|---|---|
| Phe -28 | - | expression tag |
| Cys -27 | - | expression tag |
| Leu -26 | - | expression tag |
| Thr -25 | - | expression tag |
| Leu -24 | - | expression tag |
| Arg -23 | - | expression tag |
| Arg -22 | - | expression tag |
| Arg -21 | - | expression tag |
| Tyr -20 | - | expression tag |
| Thr -19 | - | expression tag |
| Met -18 | - | expression tag |
| Gly -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Ser -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Phe -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 40110.4 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 686.8 | |
| All* | Total formula weight | 40797.2 |






