5CMS
Structural Insights into the Mechanism of Escherichia coli Ymdb
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (R, A, B, C, D...) | O-acetyl-ADP-ribose deacetylase | polymer | 183 | 19636.1 | 18 | UniProt (C3TEL7) Pfam (PF01661) UniProt (by SIFTS) (P0A8D6) | Escherichia coli | Regulator of RNase III activity |
| 2 | AA, AB, CA, EA, GA... (D, Q, E, F, G...) | ADENOSINE-5-DIPHOSPHORIBOSE | non-polymer | 559.3 | 18 | Chemie (APR) | |||
| 3 | BA, BB, DA, FA, HA... (D, Q, E, F, G...) | SULFATE ION | non-polymer | 96.1 | 18 | Chemie (SO4) | |||
| 4 | CB, DB, EB, FB, GB... (R, A, B, C, D...) | water | water | 18.0 | 120 | Chemie (HOH) |
Sequence modifications
R, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q: 1 - 177 (UniProt: C3TEL7)
| PDB | External Database | Details |
|---|---|---|
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| Ala 126 | Tyr 126 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 18 |
| Total formula weight | 353450.1 | |
| Non-Polymers* | Number of molecules | 36 |
| Total formula weight | 11796.8 | |
| All* | Total formula weight | 365246.9 |
