5CG9
NgTET1 in complex with 5mC DNA in space group P3221
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D | Tet-like dioxygenase | polymer | 267 | 30725.8 | 2 | UniProt (D2W6T1) In PDB | Naegleria gruberi (Amoeba) | |
| 2 | B, E | DNA (5'-D(P*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3') | polymer | 11 | 3334.2 | 2 | synthetic construct | ||
| 3 | C, F | DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3') | polymer | 13 | 4021.6 | 2 | synthetic construct | ||
| 4 | A, D | SULFATE ION | non-polymer | 96.1 | 3 | Chemie (SO4) | |||
| 5 | A, D | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 2 | Chemie (AKG) | |||
| 6 | A, D | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 7 | D, F | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 8 | water | water | 18.0 | 14 | Chemie (HOH) |
Sequence modifications
A, D: 57 - 321 (UniProt: D2W6T1)
| PDB | External Database | Details |
|---|---|---|
| His 55 | - | expression tag |
| Met 56 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 76163.2 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 814.4 | |
| All* | Total formula weight | 76977.6 |
