5CG9
NgTET1 in complex with 5mC DNA in space group P3221
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 401 |
| Chain | Residue |
| A | GLU168 |
| A | ALA202 |
| A | ASN205 |
| D | EDO403 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | binding site for residue AKG A 402 |
| Chain | Residue |
| A | TYR242 |
| A | LEU253 |
| A | HIS279 |
| A | VAL281 |
| A | ARG289 |
| A | VAL293 |
| A | MN403 |
| A | HOH501 |
| C | 5CM20 |
| A | ASN214 |
| A | ARG224 |
| A | HIS229 |
| A | ASP231 |
| A | LEU240 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue MN A 403 |
| Chain | Residue |
| A | HIS229 |
| A | ASP231 |
| A | HIS279 |
| A | AKG402 |
| A | HOH501 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 D 401 |
| Chain | Residue |
| A | ASN175 |
| A | TYR201 |
| A | ASN205 |
| D | ASN175 |
| D | TYR201 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 D 402 |
| Chain | Residue |
| D | GLU168 |
| D | ALA202 |
| D | ASN205 |
| D | EDO403 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue EDO D 403 |
| Chain | Residue |
| A | SO4401 |
| D | SO4402 |
| site_id | AC7 |
| Number of Residues | 14 |
| Details | binding site for residue AKG D 404 |
| Chain | Residue |
| D | ASN214 |
| D | ARG224 |
| D | HIS229 |
| D | ASP231 |
| D | LEU240 |
| D | TYR242 |
| D | LEU253 |
| D | HIS279 |
| D | VAL281 |
| D | ARG289 |
| D | VAL293 |
| D | MN405 |
| D | HOH501 |
| F | 5CM20 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue MN D 405 |
| Chain | Residue |
| D | HIS229 |
| D | ASP231 |
| D | HIS279 |
| D | AKG404 |
| D | HOH501 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue EDO F 101 |
| Chain | Residue |
| E | DG8 |
| F | DA18 |
| F | DG19 |
| site_id | AD1 |
| Number of Residues | 14 |
| Details | binding site for Di-nucleotide DG F 19 and 5CM F 20 |
| Chain | Residue |
| D | TYR141 |
| D | ASN147 |
| D | ARG224 |
| D | ASP234 |
| D | VAL293 |
| D | PHE295 |
| D | HIS297 |
| D | AKG404 |
| E | DG8 |
| E | DC9 |
| E | DT10 |
| F | DA18 |
| F | DG21 |
| F | EDO101 |
| site_id | AD2 |
| Number of Residues | 14 |
| Details | binding site for Di-nucleotide 5CM F 20 and DG F 21 |
| Chain | Residue |
| D | TYR141 |
| D | ASN147 |
| D | TYR153 |
| D | ARG224 |
| D | ASP234 |
| D | VAL293 |
| D | PHE295 |
| D | HIS297 |
| D | GLN310 |
| D | AKG404 |
| E | DG6 |
| E | DC7 |
| F | DG19 |
| F | DC22 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 200 |
| Details | Domain: {"description":"Fe2OG dioxygenase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"24390346","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26323320","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LT5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5CG8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5CG9","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24390346","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"26323320","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24390346","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26323320","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4LT5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5CG8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5CG9","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"24390346","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26323320","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Site: {"description":"Interaction with DNA","evidences":[{"source":"PubMed","id":"24390346","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26323320","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
