5CG8
NgTET1 in complex with 5hmC DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Tet-like dioxygenase | polymer | 267 | 30725.8 | 1 | UniProt (D2W6T1) In PDB | Naegleria gruberi (Amoeba) | |
| 2 | B | DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3') | polymer | 14 | 4239.8 | 1 | synthetic construct | ||
| 3 | C | DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3') | polymer | 14 | 4349.9 | 1 | synthetic construct | ||
| 4 | A | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 5 | A | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 6 | water | water | 18.0 | 3 | Chemie (HOH) |
Sequence modifications
A: 57 - 321 (UniProt: D2W6T1)
| PDB | External Database | Details |
|---|---|---|
| His 55 | - | expression tag |
| Met 56 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 39315.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 201.0 | |
| All* | Total formula weight | 39516.4 |
