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5CBT

Human Cyclophilin D Complexed with Inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Peptidyl-prolyl cis-trans isomerase F, mitochondrialpolymer16517783.31UniProt (P30405)
Pfam (PF00160)
Homo sapiens (Human)PPIase F,Cyclophilin D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F
2B
(A)
ethyl N-(benzylcarbamoyl)glycinatenon-polymer236.31Chemie (4ZL)
3C, D
(A)
POTASSIUM IONnon-polymer39.12Chemie (K)
4E
(A)
FORMIC ACIDnon-polymer46.01Chemie (FMT)
5F
(A)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
6G
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
7H
(A)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
8I
(A)
waterwater18.0123Chemie (HOH)
Sequence modifications
A: 2 - 165 (UniProt: P30405)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ile 133Lys 175conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17783.3
Non-Polymers*Number of molecules7
Total formula weight767.0
All*Total formula weight18550.3
*Water molecules are not included.

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PDB entries from 2026-01-14

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