5C7T
Crystal Structure of the Bdellovibrio bacteriovorus Nucleoside Diphosphate Sugar Hydrolase in complex with ADP-ribose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | NudF protein | polymer | 182 | 21290.5 | 2 | UniProt (Q6MIH8) Pfam (PF00293) | Bdellovibrio bacteriovorus | |
| 2 | C, O (A, B) | ADENOSINE-5-DIPHOSPHORIBOSE | non-polymer | 559.3 | 2 | Chemie (APR) | |||
| 3 | D, E, F, K, L... (A, B) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 4 | G, H, I, P, Q... (A, B) | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
| 5 | J (A) | 2-(2-METHOXYETHOXY)ETHANOL | non-polymer | 120.1 | 1 | Chemie (PG0) | |||
| 6 | N (B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 7 | T (B) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 8 | U, V (A, B) | water | water | 18.0 | 212 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 182 (UniProt: Q6MIH8)
| PDB | External Database | Details |
|---|---|---|
| Gln 140 | Glu 140 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 42580.9 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2716.1 | |
| All* | Total formula weight | 45297.0 |
