5BYG
X-ray structure of AAV2 OBD-AAVS1 complex 2:1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Protein Rep78 | polymer | 213 | 24551.8 | 4 | UniProt (Q89268) Pfam (PF08724) In PDB | Adeno-associated virus 2 (AAV-2) | |
2 | E, G | DNA (5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*T)-3') | polymer | 21 | 6343.1 | 2 | Homo sapiens | ||
3 | F, H | DNA (5'-D(*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*CP*CP*GP*A)-3') | polymer | 21 | 6548.2 | 2 | Homo sapiens | ||
4 | A, B, C | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
5 | A, C | CITRIC ACID | non-polymer | 192.1 | 2 | Chemie (CIT) | |||
6 | water | water | 18.0 | 128 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 210 (UniProt: Q89268)
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Ser 151 | Cys 151 | engineered mutation |
Phe 156 | Tyr 156 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 123989.9 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 457.2 | |
All* | Total formula weight | 124447.0 |