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5BWO

Crystal Structure of Human SIRT3 in Complex with a Palmitoyl H3K9 Peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
Palmitoyl H3K9 Peptidepolymer101093.21UniProt (by SIFTS) (Q6NXT2)synthetic construct
2B
(A)
NAD-dependent protein deacetylase sirtuin-3, mitochondrialpolymer30934402.41UniProt (Q9NTG7)
Pfam (PF02146)
Homo sapiens (Human)hSIRT3,Regulatory protein SIR2 homolog 3,SIR2-like protein 3
3C
(B)
PALMITIC ACIDnon-polymer256.41Chemie (PLM)
4D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5E, F
(B, A)
waterwater18.0104Chemie (HOH)
Sequence modifications
A: 118 - 399 (UniProt: Q9NTG7)
PDBExternal DatabaseDetails
Met 91-expression tag
Ala 92-expression tag
Ser 93-expression tag
Met 94-expression tag
Thr 95-expression tag
Gly 96-expression tag
Gly 97-expression tag
Gln 98-expression tag
Gln 99-expression tag
Met 100-expression tag
Gly 101-expression tag
Arg 102-expression tag
Gly 103-expression tag
Ser 104-expression tag
His 105-expression tag
His 106-expression tag
His 107-expression tag
His 108-expression tag
His 109-expression tag
His 110-expression tag
Glu 111-expression tag
Asn 112-expression tag
Leu 113-expression tag
Tyr 114-expression tag
Phe 115-expression tag
Gln 116-expression tag
Gly 117-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35495.6
Non-Polymers*Number of molecules2
Total formula weight321.8
All*Total formula weight35817.5
*Water molecules are not included.

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PDB entries from 2025-12-31

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