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5BPC

DNA polymerase beta ternary complex with a templating 5ClC and incoming dATP analog

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
2B
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3')polymer103061.01synthetic construct
4D
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164863.61synthetic construct
5E, F, G, H
(A)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
6I
(A)
2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosinenon-polymer489.21Chemie (F2A)
7J
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
8K, L, M, N
(A, D, P, T)
waterwater18.0188Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47702.3
Non-Polymers*Number of molecules6
Total formula weight732.0
All*Total formula weight48434.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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