5B4W
Crystal structure of Plexin inhibitor complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... | Plexin-B1 | polymer | 579 | 61933.5 | 6 | UniProt (O43157) Pfam (PF01403) Pfam (PF01437) In PDB | Homo sapiens (Human) | Semaphorin receptor SEP |
| 2 | G, H, I, J, K... | Synthesized cyclic peptide | polymer | 18 | 2019.4 | 6 | unidentified | ||
| 3 | A, B, C, D, E... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) | |||
| 4 | water | water | 18.0 | 48 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 20 - 535 (UniProt: O43157)
| PDB | External Database | Details |
|---|---|---|
| Met -12 | - | See Sequence details |
| Asp -11 | - | See Sequence details |
| Ser -10 | - | See Sequence details |
| Lys -9 | - | See Sequence details |
| Gly -8 | - | See Sequence details |
| Ser -7 | - | See Sequence details |
| Ser -6 | - | See Sequence details |
| Gln -5 | - | See Sequence details |
| Lys -4 | - | See Sequence details |
| Gly -3 | - | See Sequence details |
| Ser -2 | - | See Sequence details |
| Arg -1 | - | See Sequence details |
| Leu 0 | - | See Sequence details |
| Leu 1 | - | See Sequence details |
| Leu 2 | - | See Sequence details |
| Leu 3 | - | See Sequence details |
| Leu 4 | - | See Sequence details |
| Val 5 | - | See Sequence details |
| Val 6 | - | See Sequence details |
| Ser 7 | - | See Sequence details |
| Asn 8 | - | See Sequence details |
| Leu 9 | - | See Sequence details |
| Leu 10 | - | See Sequence details |
| Leu 11 | - | See Sequence details |
| Cys 12 | - | See Sequence details |
| Gln 13 | - | See Sequence details |
| Gly 14 | - | See Sequence details |
| Val 15 | - | See Sequence details |
| Val 16 | - | See Sequence details |
| Ser 17 | - | See Sequence details |
| Gly 18 | - | See Sequence details |
| Ser 19 | - | See Sequence details |
| Thr 536 | - | expression tag |
| Arg 537 | - | expression tag |
| Glu 538 | - | expression tag |
| Asn 539 | - | expression tag |
| Leu 540 | - | expression tag |
| Tyr 541 | - | expression tag |
| Phe 542 | - | expression tag |
| Gln 543 | - | expression tag |
| Gly 544 | - | expression tag |
| Lys 545 | - | expression tag |
| Asp 546 | - | expression tag |
| Gly 547 | - | expression tag |
| Gly 548 | - | expression tag |
| Gly 549 | - | expression tag |
| Gly 550 | - | expression tag |
| Gly 551 | - | expression tag |
| Ser 552 | - | expression tag |
| His 553 | - | expression tag |
| Met 554 | - | expression tag |
| Gly 555 | - | expression tag |
| Val 556 | - | expression tag |
| Ala 557 | - | expression tag |
| Met 558 | - | expression tag |
| Pro 559 | - | expression tag |
| Gly 560 | - | expression tag |
| Ala 561 | - | expression tag |
| Glu 562 | - | expression tag |
| Asp 563 | - | expression tag |
| Asp 564 | - | expression tag |
| Val 565 | - | expression tag |
| Val 566 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 383717.2 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1548.5 | |
| All* | Total formula weight | 385265.7 |
