4ZQ9
X-ray structure of AAV-2 OBD bound to AAVS1 site 3:1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Protein Rep68 | polymer | 211 | 24412.7 | 3 | UniProt (P03132) Pfam (PF08724) In PDB | Adeno-associated virus 2 (isolate Srivastava/1982) (AAV-2) | |
2 | D | DNA (5'-D(*GP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*CP*GP*CP*TP*GP*GP*GP*C)-3') | polymer | 21 | 6408.1 | 1 | Homo sapiens | ||
3 | E | DNA (5'-D(*CP*GP*CP*CP*CP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*GP*AP*GP*CP*G)-3') | polymer | 21 | 6484.2 | 1 | Homo sapiens | ||
4 | A, C | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
5 | water | water | 18.0 | 58 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 208 (UniProt: P03132)
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Glu 17 | Gly 17 | conflict |
Ser 151 | Cys 151 | engineered mutation |
Phe 156 | Tyr 156 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 86130.3 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 109.9 | |
All* | Total formula weight | 86240.2 |