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4ZG9

Structural basis for inhibition of human autotaxin by four novel compounds

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2polymer86399128.62UniProt (Q13822)
Pfam (PF01033)
Pfam (PF01663)
Pfam (PF01223)
Homo sapiens (Human)E-NPP 2,Autotaxin,Extracellular lysophospholipase D,LysoPLD
2C
(C)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
3D
(D)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
4E, F, N, O
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
5G, P
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
6H, I, Q, R
(A, B)
SODIUM IONnon-polymer23.04Chemie (NA)
7J, K, S, T
(A, B)
3-[(11aS)-6-(4-fluorobenzyl)-1,3-dioxo-5,6,11,11a-tetrahydro-1H-imidazo[1',5':1,6]pyrido[3,4-b]indol-2(3H)-yl]propanoic acidnon-polymer421.44Chemie (4O2)
8L, M, U
(A, B)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
9V, W
(A, B)
waterwater18.051Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight198257.3
BranchedNumber of molecules2
Total formula weight1010.9
Non-Polymers*Number of molecules17
Total formula weight2305.6
All*Total formula weight201573.8
*Water molecules are not included.

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PDB entries from 2025-06-11

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