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4ZDO

The crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
O-phosphoseryl-tRNA(Sec) selenium transferasepolymer50155787.24UniProt (Q9HD40)
Pfam (PF05889)
Homo sapiens (Human)Liver-pancreas antigen,LP,SLA-p35,SLA/LP autoantigen,Selenocysteine synthase,Sec synthase,Selenocysteinyl-tRNA(Sec) synthase,Sep-tRNA:Sec-tRNA synthase,SepSecS,Soluble liver antigen,SLA,UGA suppressor tRNA-associated protein,tRNA(Ser/Sec)-associated antigenic protein
2E
(E)
selenocysteine tRNApolymer8727968.51GenBank (28372595)Homo sapiens
3F, H, J, L
(A, B, C, D)
(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATEnon-polymer233.24Chemie (PLR)
4G, I, K, M
(A, B, C, D)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
5N, O, P, Q, R
(A, B, C, D, E)
waterwater18.0469Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 501 (UniProt: Q9HD40)
PDBExternal DatabaseDetails
Ser 325Thr 325engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight251117.3
Non-Polymers*Number of molecules8
Total formula weight1312.5
All*Total formula weight252429.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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