4Z7V
L3-12 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C | MHC class II HLA-DQ-alpha chain | polymer | 192 | 21882.2 | 2 | UniProt (Q30069) Pfam (PF00993) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
| 2 | B, D | MHC class II HLA-DQ-beta-1 | polymer | 213 | 24484.2 | 2 | UniProt (O19707) Pfam (PF00969) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
| 3 | E, G | T-CELL RECEPTOR, L3-12 ALPHA CHAIN | polymer | 204 | 22850.2 | 2 | Homo sapiens (Human) | ||
| 4 | F, H | T-CELL RECEPTOR, L3-12 BETA CHAIN | polymer | 244 | 27475.3 | 2 | Homo sapiens (Human) | ||
| 5 | I, J | deamidated DQ8-glia-alpha1 peptide | polymer | 18 | 1803.8 | 2 | UniProt (by SIFTS) (P18573) In PDB | Triticum aestivum (bread wheat) | |
| 6 | K | alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1041.0 | 1 | In PDB GlyTouCan (G73409CU) | |||
| 7 | L | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 716.7 | 1 | In PDB GlyTouCan (G63564LA) | |||
| 8 | A, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 9 | water | water | 18.0 | 335 | Chemie (HOH) |
Sequence modifications
A, C: -1 - 181 (UniProt: Q30069)
B, D: 1 - 192 (UniProt: O19707)
| PDB | External Database | Details |
|---|---|---|
| Thr 182 | - | expression tag |
| Ser 183 | - | expression tag |
| Gly 184 | - | expression tag |
| Asp 185 | - | expression tag |
| Asp 186 | - | expression tag |
| Asp 187 | - | expression tag |
| Asp 188 | - | expression tag |
| Lys 189 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -12 | - | expression tag |
| Gly -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ile -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Arg -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Ser -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Thr 193 | - | expression tag |
| Gly 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Asp 196 | - | expression tag |
| Asp 197 | - | expression tag |
| Asp 198 | - | expression tag |
| Asp 199 | - | expression tag |
| Lys 200 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 196991.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1757.6 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 199191.6 |
