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4YTN

Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with N-[3-(pentafluorophenoxy)phenyl]-2-(trifluoromethyl)benzamide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Succinate dehydrogenase flavoproteinpolymer64571392.22UniProt (U1LRQ3)
Pfam (PF00890)
Pfam (PF02910)
UniProt (by SIFTS) (Q33862)
Ascaris suum (Pig roundworm)RHODOQUINOL-FUMARATE REDUCTASE FP SUBUNIT
2B, F
(B, F)
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrialpolymer28231674.02UniProt (O44074)
Pfam (PF13085)
Pfam (PF13534)
Ascaris suum (Pig roundworm)RHODOQUINOL-FUMARATE REDUCTASE IP SUBUNIT
3C, G
(C, G)
Cytochrome b-large subunitpolymer18821168.22UniProt (P92506)
Pfam (PF01127)
Ascaris suum (Pig roundworm)RHODOQUINOL-FUMARATE REDUCTASE CYBL SUBUNIT
4D, H
(D, H)
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrialpolymer15617014.92UniProt (P92507)
Pfam (PF05328)
Ascaris suum (Pig roundworm)CybS,Cytochrome b558 small subunit,Succinate-ubiquinone reductase membrane anchor subunit
5I, P
(A, E)
MALONATE IONnon-polymer102.02Chemie (MLI)
6J, Q
(A, E)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
7K, R
(B, F)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
8L, S
(B, F)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
9M, T
(B, F)
FE3-S4 CLUSTERnon-polymer295.82Chemie (F3S)
10N, V
(C, G)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
11O, U
(C, F)
N-[3-(pentafluorophenoxy)phenyl]-2-(trifluoromethyl)benzamidenon-polymer447.32Chemie (FD8)
12AA, BA, W, X, Y...
(E, H, A, B, C...)
waterwater18.040Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight282498.5
Non-Polymers*Number of molecules14
Total formula weight5549.2
All*Total formula weight288047.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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