4YH7
Crystal structure of PTPdelta ectodomain in complex with IL1RAPL1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Receptor-type tyrosine-protein phosphatase delta | polymer | 841 | 93559.5 | 1 | UniProt (Q64487) Pfam (PF07679) Pfam (PF13927) Pfam (PF00041) In PDB | Mus musculus (Mouse) | R-PTP-delta |
2 | B | Interleukin-1 receptor accessory protein-like 1 | polymer | 348 | 39816.3 | 1 | UniProt (P59823) Pfam (PF18452) Pfam (PF00047) In PDB | Mus musculus (Mouse) | IL1RAPL-1,X-linked interleukin-1 receptor accessory protein-like 1 |
3 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | D | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
5 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
A: 28 - 861 (UniProt: Q64487)
B: 19 - 352 (UniProt: P59823)
PDB | External Database | Details |
---|---|---|
Lys 862 | - | expression tag |
His 863 | - | expression tag |
His 864 | - | expression tag |
His 865 | - | expression tag |
His 866 | - | expression tag |
His 867 | - | expression tag |
His 868 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 12 | - | expression tag |
Gln 13 | - | expression tag |
Pro 14 | - | expression tag |
Ala 15 | - | expression tag |
Ala 16 | - | expression tag |
Arg 17 | - | expression tag |
Asp 18 | - | expression tag |
Lys 353 | - | expression tag |
His 354 | - | expression tag |
His 355 | - | expression tag |
His 356 | - | expression tag |
His 357 | - | expression tag |
His 358 | - | expression tag |
His 359 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 133375.7 | |
Branched | Number of molecules | 2 |
Total formula weight | 1335.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 135153.4 |