4YGE
Crystal structure of ERGIC-53/MCFD2, trigonal calcium-bound form 2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Protein ERGIC-53 | polymer | 246 | 27154.2 | 3 | UniProt (P49257) Pfam (PF03388) In PDB | Homo sapiens (Human) | ER-Golgi intermediate compartment 53 kDa protein,Gp58,Intracellular mannose-specific lectin MR60,Lectin mannose-binding 1 |
2 | B, D, F | Multiple coagulation factor deficiency protein 2 | polymer | 143 | 16316.8 | 3 | UniProt (Q8NI22) Pfam (PF13499) In PDB | Homo sapiens (Human) | Neural stem cell-derived neuronal survival protein |
3 | A, B, C, D, F | CALCIUM ION | non-polymer | 40.1 | 9 | Chemie (CA) | |||
4 | A, C, E | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
5 | water | water | 18.0 | 10 | Chemie (HOH) |
Sequence modifications
A, C, E: 31 - 269 (UniProt: P49257)
B, D, F: 27 - 146 (UniProt: Q8NI22)
PDB | External Database | Details |
---|---|---|
Met 24 | - | expression tag |
Asn 25 | - | expression tag |
His 26 | - | expression tag |
Lys 27 | - | expression tag |
Val 28 | - | expression tag |
His 29 | - | expression tag |
Met 30 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 4 | - | expression tag |
Gly 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
His 9 | - | expression tag |
His 10 | - | expression tag |
His 11 | - | expression tag |
His 12 | - | expression tag |
His 13 | - | expression tag |
His 14 | - | expression tag |
His 15 | - | expression tag |
Ser 16 | - | expression tag |
Ser 17 | - | expression tag |
Gly 18 | - | expression tag |
His 19 | - | expression tag |
Ile 20 | - | expression tag |
Glu 21 | - | expression tag |
Gly 22 | - | expression tag |
Arg 23 | - | expression tag |
His 24 | - | expression tag |
Met 25 | - | expression tag |
Leu 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 130413.2 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 467.1 | |
All* | Total formula weight | 130880.3 |