4YG6
Structural basis of glycan recognition in neonate-specific rotaviruses
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | Outer capsid protein VP8* | polymer | 163 | 18063.6 | 4 | UniProt (P35746) Pfam (PF00426) UniProt (by SIFTS) (A2T3T2) In PDB | Rotavirus A (RV-A) | Hemagglutinin |
| 2 | E, F, G | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 707.6 | 3 | In PDB GlyTouCan (G58896AZ) | |||
| 3 | H | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 383.3 | 1 | In PDB GlyTouCan (G00055MO) | |||
| 4 | A, B, C, D | PHOSPHATE ION | non-polymer | 95.0 | 4 | Chemie (PO4) | |||
| 5 | water | water | 18.0 | 1484 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 65 - 225 (UniProt: P35746)
| PDB | External Database | Details |
|---|---|---|
| Gly 63 | - | expression tag |
| Ser 64 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 72254.3 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2506.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 379.9 | |
| All* | Total formula weight | 75140.4 |
