4YEF
beta1 carbohydrate binding module (CBM) of AMP-activated protein kinase (AMPK) in complex with glucosyl-beta-cyclododextrin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | 5'-AMP-activated protein kinase subunit beta-1 | polymer | 89 | 9910.0 | 7 | UniProt (P80386) Pfam (PF16561) | Rattus norvegicus (Rat) | AMPKb,5'-AMP-activated protein kinase 40 kDa subunit |
| 2 | H, I, J, K, L... (H, I, J, K, L...) | Cycloheptakis-(1-4)-(alpha-D-glucopyranose) | branched | 1153.0 | 7 | In PDB BIRD (PRD_900012) GlyTouCan (G01435GL) | beta-cyclodextrin | ||
| 3 | O, R (A, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 4 | P, Q, S, T, U... (B, D, E, F) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
| 5 | AA, BA, CA, W, X... (E, F, G, A, B...) | water | water | 18.0 | 684 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G: 76 - 156 (UniProt: P80386)
| PDB | External Database | Details |
|---|---|---|
| Gly 68 | - | expression tag |
| Pro 69 | - | expression tag |
| Leu 70 | - | expression tag |
| Gly 71 | - | expression tag |
| Ser 72 | - | expression tag |
| Pro 73 | - | expression tag |
| Asn 74 | - | expression tag |
| Ser 75 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 69369.9 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 8071.0 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 760.6 | |
| All* | Total formula weight | 78201.5 |
